Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm28043E0CXC2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm28043E0CXC2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm28043E0CXC2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28043E0CXC2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Gm28043E0CXC2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.47■□□□□ 0.71
Gm28043E0CXC2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.47■□□□□ 0.71
Gm28043E0CXC2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm28043E0CXC2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28043E0CXC2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Gm28043E0CXC2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm28043E0CXC2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm28043E0CXC2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm28043E0CXC2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Gm28043E0CXC2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28043E0CXC2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28043E0CXC2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28043E0CXC2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28043E0CXC2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gm28043E0CXC2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm28043E0CXC2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Gm28043E0CXC2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Gm12922-201ENSMUST00000120626 809 ntBASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm28043E0CXC2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms