Protein–RNA interactions for Protein: D3YUJ3

Ccnyl1, Cyclin Y-like 1, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnyl1D3YUJ3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccnyl1D3YUJ3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccnyl1D3YUJ3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccnyl1D3YUJ3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccnyl1D3YUJ3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ccnyl1D3YUJ3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccnyl1D3YUJ3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ccnyl1D3YUJ3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccnyl1D3YUJ3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccnyl1D3YUJ3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccnyl1D3YUJ3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccnyl1D3YUJ3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccnyl1D3YUJ3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccnyl1D3YUJ3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccnyl1D3YUJ3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccnyl1D3YUJ3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ccnyl1D3YUJ3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ccnyl1D3YUJ3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccnyl1D3YUJ3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccnyl1D3YUJ3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccnyl1D3YUJ3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccnyl1D3YUJ3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccnyl1D3YUJ3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccnyl1D3YUJ3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.18■□□□□ 0.82
Ccnyl1D3YUJ3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccnyl1D3YUJ3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccnyl1D3YUJ3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccnyl1D3YUJ3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ccnyl1D3YUJ3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Ccnyl1D3YUJ3 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms