Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.69■□□□□ 0.9
Rfx8D3YU81 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx8D3YU81 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Gm8493-201ENSMUST00000196881 489 ntBASIC20.68■□□□□ 0.9
Rfx8D3YU81 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx8D3YU81 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Gm12251-201ENSMUST00000117893 792 ntBASIC20.67■□□□□ 0.9
Rfx8D3YU81 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx8D3YU81 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.66■□□□□ 0.9
Rfx8D3YU81 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.66■□□□□ 0.9
Rfx8D3YU81 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.66■□□□□ 0.9
Rfx8D3YU81 Gm6139-201ENSMUST00000079261 882 ntBASIC20.66■□□□□ 0.9
Rfx8D3YU81 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Rfx8D3YU81 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfx8D3YU81 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Rfx8D3YU81 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx8D3YU81 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx8D3YU81 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx8D3YU81 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rfx8D3YU81 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx8D3YU81 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx8D3YU81 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rfx8D3YU81 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx8D3YU81 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rfx8D3YU81 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rfx8D3YU81 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.64■□□□□ 0.89
Rfx8D3YU81 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfx8D3YU81 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx8D3YU81 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.63■□□□□ 0.89
Rfx8D3YU81 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx8D3YU81 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx8D3YU81 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx8D3YU81 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx8D3YU81 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx8D3YU81 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx8D3YU81 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Gm43173-201ENSMUST00000202246 593 ntBASIC20.62■□□□□ 0.89
Rfx8D3YU81 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx8D3YU81 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms