Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hist1h2acC0HKE2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hist1h2acC0HKE2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hist1h2acC0HKE2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hist1h2acC0HKE2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hist1h2acC0HKE2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Hist1h2acC0HKE2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hist1h2acC0HKE2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hist1h2acC0HKE2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h2acC0HKE2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h2acC0HKE2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hist1h2acC0HKE2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hist1h2acC0HKE2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.79■□□□□ 0.44
Hist1h2acC0HKE2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hist1h2acC0HKE2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hist1h2acC0HKE2 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.79■□□□□ 0.44
Hist1h2acC0HKE2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hist1h2acC0HKE2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hist1h2acC0HKE2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms