Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.83■■□□□ 1.09
Krt28A6BLY7 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Krt28A6BLY7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Krt28A6BLY7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Krt28A6BLY7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Krt28A6BLY7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Krt28A6BLY7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt28A6BLY7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt28A6BLY7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt28A6BLY7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Krt28A6BLY7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt28A6BLY7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.81■■□□□ 1.08
Krt28A6BLY7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.81■■□□□ 1.08
Krt28A6BLY7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt28A6BLY7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt28A6BLY7 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Krt28A6BLY7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Rab3c-203ENSMUST00000224180 967 ntBASIC21.8■■□□□ 1.08
Krt28A6BLY7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Krt28A6BLY7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt28A6BLY7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt28A6BLY7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt28A6BLY7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Krt28A6BLY7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt28A6BLY7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt28A6BLY7 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.79■■□□□ 1.08
Krt28A6BLY7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt28A6BLY7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Krt28A6BLY7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.78■■□□□ 1.08
Krt28A6BLY7 Gm26524-201ENSMUST00000192339 390 ntBASIC21.78■■□□□ 1.08
Krt28A6BLY7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.78■■□□□ 1.08
Krt28A6BLY7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Krt28A6BLY7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
Krt28A6BLY7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.77■■□□□ 1.08
Krt28A6BLY7 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.77■■□□□ 1.08
Krt28A6BLY7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Krt28A6BLY7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Krt28A6BLY7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt28A6BLY7 Gm6576-201ENSMUST00000169678 883 ntBASIC21.76■■□□□ 1.07
Krt28A6BLY7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.76■■□□□ 1.07
Krt28A6BLY7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
Krt28A6BLY7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Krt28A6BLY7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Krt28A6BLY7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.75■■□□□ 1.07
Krt28A6BLY7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt28A6BLY7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Krt28A6BLY7 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Krt28A6BLY7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.73■■□□□ 1.07
Krt28A6BLY7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms