Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 CT010467.1-202ENSMUST00000205406 714 ntBASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm23634-201ENSMUST00000175071 91 ntBASIC10.54□□□□□ -0.72
Ubr4A2AN08 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Gm6345-202ENSMUST00000180900 204 ntBASIC10.54□□□□□ -0.72
Ubr4A2AN08 Gm8587-201ENSMUST00000076538 843 ntBASIC10.54□□□□□ -0.72
Ubr4A2AN08 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ubr4A2AN08 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.53□□□□□ -0.72
Ubr4A2AN08 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Ubr4A2AN08 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr4A2AN08 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC10.52□□□□□ -0.72
Ubr4A2AN08 CT030146.1-201ENSMUST00000220919 217 ntBASIC10.52□□□□□ -0.72
Ubr4A2AN08 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Ubr4A2AN08 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Ubr4A2AN08 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ubr4A2AN08 AW822252-206ENSMUST00000208904 237 ntBASIC10.52□□□□□ -0.73
Ubr4A2AN08 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 AC157650.3-201ENSMUST00000225058 1476 ntBASIC10.52□□□□□ -0.73
Ubr4A2AN08 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ubr4A2AN08 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ubr4A2AN08 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Gm43353-201ENSMUST00000199224 1295 ntBASIC10.51□□□□□ -0.73
Ubr4A2AN08 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 AC175538.1-201ENSMUST00000225343 1269 ntBASIC10.51□□□□□ -0.73
Ubr4A2AN08 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC10.51□□□□□ -0.73
Ubr4A2AN08 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Gm6443-201ENSMUST00000203599 874 ntBASIC10.51□□□□□ -0.73
Ubr4A2AN08 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
Ubr4A2AN08 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 AA414768-201ENSMUST00000121924 1257 ntBASIC10.5□□□□□ -0.73
Ubr4A2AN08 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Gm13509-201ENSMUST00000119733 1308 ntBASIC10.5□□□□□ -0.73
Ubr4A2AN08 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Gm14859-201ENSMUST00000117752 357 ntBASIC10.5□□□□□ -0.73
Ubr4A2AN08 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.5□□□□□ -0.73
Ubr4A2AN08 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ubr4A2AN08 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms