Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
Shroom2A2ALU4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Shroom2A2ALU4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Shroom2A2ALU4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Shroom2A2ALU4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Shroom2A2ALU4 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Shroom2A2ALU4 Gm6728-201ENSMUST00000178117 1065 ntBASIC31.61■■■□□ 2.65
Shroom2A2ALU4 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Shroom2A2ALU4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Shroom2A2ALU4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC31.61■■■□□ 2.65
Shroom2A2ALU4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Shroom2A2ALU4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC31.6■■■□□ 2.65
Shroom2A2ALU4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Shroom2A2ALU4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Shroom2A2ALU4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC31.59■■■□□ 2.65
Shroom2A2ALU4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shroom2A2ALU4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shroom2A2ALU4 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shroom2A2ALU4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shroom2A2ALU4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Shroom2A2ALU4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC31.59■■■□□ 2.65
Shroom2A2ALU4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Shroom2A2ALU4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC31.57■■■□□ 2.65
Shroom2A2ALU4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
Shroom2A2ALU4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Shroom2A2ALU4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Shroom2A2ALU4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Shroom2A2ALU4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Gm18666-201ENSMUST00000190039 958 ntBASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Shroom2A2ALU4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Shroom2A2ALU4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Shroom2A2ALU4 Gm2559-201ENSMUST00000201323 363 ntBASIC31.55■■■□□ 2.64
Shroom2A2ALU4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Shroom2A2ALU4 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Shroom2A2ALU4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Shroom2A2ALU4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Shroom2A2ALU4 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Shroom2A2ALU4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Shroom2A2ALU4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Shroom2A2ALU4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Gm10167-201ENSMUST00000150411 1479 ntBASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shroom2A2ALU4 Gm25925-201ENSMUST00000158314 306 ntBASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Gm8668-201ENSMUST00000120559 1447 ntBASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Shroom2A2ALU4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Shroom2A2ALU4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Shroom2A2ALU4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
Shroom2A2ALU4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC31.51■■■□□ 2.63
Shroom2A2ALU4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC31.51■■■□□ 2.63
Shroom2A2ALU4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Shroom2A2ALU4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
Shroom2A2ALU4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Shroom2A2ALU4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC31.51■■■□□ 2.63
Shroom2A2ALU4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Shroom2A2ALU4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Shroom2A2ALU4 Mir6236-201ENSMUST00000184437 123 ntBASIC31.5■■■□□ 2.63
Shroom2A2ALU4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Shroom2A2ALU4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Shroom2A2ALU4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
Shroom2A2ALU4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC31.49■■■□□ 2.63
Shroom2A2ALU4 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
Shroom2A2ALU4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Shroom2A2ALU4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Shroom2A2ALU4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Shroom2A2ALU4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Shroom2A2ALU4 Gm6659-201ENSMUST00000174752 547 ntBASIC31.47■■■□□ 2.63
Shroom2A2ALU4 Gm21596-201ENSMUST00000178049 1316 ntBASIC31.47■■■□□ 2.63
Shroom2A2ALU4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Shroom2A2ALU4 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
Shroom2A2ALU4 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Shroom2A2ALU4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Shroom2A2ALU4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms