Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a21A0A1B0GSD2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a21A0A1B0GSD2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a21A0A1B0GSD2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a21A0A1B0GSD2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.38■■□□□ 1.01
Slc6a21A0A1B0GSD2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm22240-201ENSMUST00000175225 82 ntBASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm6420-201ENSMUST00000193885 723 ntBASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Slc6a21A0A1B0GSD2 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc6a21A0A1B0GSD2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Slc6a21A0A1B0GSD2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.35■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm5408-201ENSMUST00000197998 747 ntBASIC21.35■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc6a21A0A1B0GSD2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Slc6a21A0A1B0GSD2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Slc6a21A0A1B0GSD2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a21A0A1B0GSD2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a21A0A1B0GSD2 Gm13534-201ENSMUST00000121169 513 ntBASIC21.33■■□□□ 1.01
Slc6a21A0A1B0GSD2 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.33■■□□□ 1.01
Slc6a21A0A1B0GSD2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Slc6a21A0A1B0GSD2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Slc6a21A0A1B0GSD2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc6a21A0A1B0GSD2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Slc6a21A0A1B0GSD2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Gm10655-201ENSMUST00000098658 1397 ntBASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Slc6a21A0A1B0GSD2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Gm8520-201ENSMUST00000186517 868 ntBASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Slc6a21A0A1B0GSD2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc6a21A0A1B0GSD2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.3■■□□□ 1
Slc6a21A0A1B0GSD2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a21A0A1B0GSD2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Slc6a21A0A1B0GSD2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms