Protein–RNA interactions for Protein: A0A140T8T4

Rpl9-ps6, Ribosomal protein L9, pseudogene 6, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl9-ps6A0A140T8T4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rpl9-ps6A0A140T8T4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl9-ps6A0A140T8T4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm42642-201ENSMUST00000200683 355 ntBASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm42778-201ENSMUST00000199644 553 ntBASIC20.02■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.02■□□□□ 0.8
Rpl9-ps6A0A140T8T4 Gm9988-201ENSMUST00000069786 435 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms