Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rpl23a-ps3A0A140T8M7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gm22238-201ENSMUST00000175222 88 ntBASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rpl23a-ps3A0A140T8M7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms