Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trav23A0A0G2JG17 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav23A0A0G2JG17 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav23A0A0G2JG17 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav23A0A0G2JG17 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav23A0A0G2JG17 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav23A0A0G2JG17 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav23A0A0G2JG17 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav23A0A0G2JG17 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav23A0A0G2JG17 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Gm8493-201ENSMUST00000196881 489 ntBASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav23A0A0G2JG17 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Gm12251-201ENSMUST00000117893 792 ntBASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav23A0A0G2JG17 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Gm6139-201ENSMUST00000079261 882 ntBASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav23A0A0G2JG17 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms