Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Atg4a-psA0A0G2JFS9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Atg4a-psA0A0G2JFS9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Smad6-203ENSMUST00000179458 273 ntBASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.88■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
Atg4a-psA0A0G2JFS9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atg4a-psA0A0G2JFS9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
Atg4a-psA0A0G2JFS9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Gm43017-201ENSMUST00000198296 752 ntBASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.79■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Atg4a-psA0A0G2JFS9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms