Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gm8495-201ENSMUST00000188740 694 ntBASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Gm43137-201ENSMUST00000198052 594 ntBASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sirpb1bA0A0A6YXN8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Gm18284-201ENSMUST00000172604 624 ntBASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sirpb1bA0A0A6YXN8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms