Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm9870-201ENSMUST00000063874 645 ntBASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Gm21956-201ENSMUST00000179946 522 ntBASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.03■□□□□ -0
Trav6d-7A0A075B6B0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav6d-7A0A075B6B0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-7A0A075B6B0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-7A0A075B6B0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav6d-7A0A075B6B0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Trav6d-7A0A075B6B0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.02□□□□□ -0.01
Trav6d-7A0A075B6B0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-7A0A075B6B0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav6d-7A0A075B6B0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav6d-7A0A075B6B0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav6d-7A0A075B6B0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav6d-7A0A075B6B0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav6d-7A0A075B6B0 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav6d-7A0A075B6B0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms