Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav5-4A0A075B652 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav5-4A0A075B652 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav5-4A0A075B652 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav5-4A0A075B652 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav5-4A0A075B652 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-4A0A075B652 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-4A0A075B652 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-4A0A075B652 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-4A0A075B652 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav5-4A0A075B652 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trav5-4A0A075B652 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
Trav5-4A0A075B652 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.21■□□□□ 0.18
Trav5-4A0A075B652 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav5-4A0A075B652 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav5-4A0A075B652 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav5-4A0A075B652 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav5-4A0A075B652 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms