Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav12-3A0A075B648 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav12-3A0A075B648 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12-3A0A075B648 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12-3A0A075B648 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav12-3A0A075B648 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav12-3A0A075B648 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav12-3A0A075B648 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav12-3A0A075B648 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12-3A0A075B648 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Mir3960-201ENSMUST00000198213 73 ntBASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12-3A0A075B648 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12-3A0A075B648 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms