Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav8-1A0A075B641 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14□□□□□ -0.17
Trav8-1A0A075B641 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav8-1A0A075B641 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav8-1A0A075B641 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav8-1A0A075B641 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav8-1A0A075B641 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav8-1A0A075B641 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav8-1A0A075B641 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav8-1A0A075B641 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Trav8-1A0A075B641 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms