Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-7-dv9A0A075B639 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-7-dv9A0A075B639 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-7-dv9A0A075B639 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-7-dv9A0A075B639 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-7-dv9A0A075B639 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Trav6-7-dv9A0A075B639 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.31■□□□□ 0.36
Trav6-7-dv9A0A075B639 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-7-dv9A0A075B639 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-7-dv9A0A075B639 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-7-dv9A0A075B639 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-7-dv9A0A075B639 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.3■□□□□ 0.36
Trav6-7-dv9A0A075B639 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav6-7-dv9A0A075B639 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-7-dv9A0A075B639 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-7-dv9A0A075B639 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-7-dv9A0A075B639 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-7-dv9A0A075B639 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Golph3-202ENSMUST00000226517 2359 ntBASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm9847-201ENSMUST00000052528 599 ntBASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trav6-7-dv9A0A075B639 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav6-7-dv9A0A075B639 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav6-7-dv9A0A075B639 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trav6-7-dv9A0A075B639 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-7-dv9A0A075B639 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Trav6-7-dv9A0A075B639 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav6-7-dv9A0A075B639 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav6-7-dv9A0A075B639 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav6-7-dv9A0A075B639 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Trav6-7-dv9A0A075B639 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms