Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav5-1A0A075B5Z7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav5-1A0A075B5Z7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav5-1A0A075B5Z7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trav5-1A0A075B5Z7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.79■□□□□ 0.28
Trav5-1A0A075B5Z7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-1A0A075B5Z7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-1A0A075B5Z7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-1A0A075B5Z7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trav5-1A0A075B5Z7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trav5-1A0A075B5Z7 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trav5-1A0A075B5Z7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trav5-1A0A075B5Z7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm42778-201ENSMUST00000199644 553 ntBASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trav5-1A0A075B5Z7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trav5-1A0A075B5Z7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trav5-1A0A075B5Z7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trav5-1A0A075B5Z7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav5-1A0A075B5Z7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav5-1A0A075B5Z7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms