Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Lsm6-203ENSMUST00000130325 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm5434-202ENSMUST00000222384 1451 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm5434-201ENSMUST00000071825 1451 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Dnm3-201ENSMUST00000070330 4601 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Abcc12-205ENSMUST00000152438 3083 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Pik3c3-203ENSMUST00000115812 3257 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm28693-201ENSMUST00000189622 2638 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.32□□□□□ -0.92
Clrn1Q8K445 D030018L15Rik-203ENSMUST00000140253 2902 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Clrn1Q8K445 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm18616-201ENSMUST00000222898 1400 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Clec4f-201ENSMUST00000014686 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Mitf-202ENSMUST00000043637 4881 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Tomm40l-202ENSMUST00000111326 2753 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Apex2-203ENSMUST00000112720 4742 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 AC164437.1-201ENSMUST00000227321 2308 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Pcdhb4-201ENSMUST00000056712 3718 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Smgc-204ENSMUST00000109277 855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Rhox4a-201ENSMUST00000115194 925 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm11518-201ENSMUST00000118048 411 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm14176-201ENSMUST00000121302 477 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm12221-201ENSMUST00000125096 1131 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm8379-201ENSMUST00000165448 1192 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm2907-201ENSMUST00000181256 1192 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm7069-201ENSMUST00000182418 1008 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm5259-201ENSMUST00000191231 800 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm37293-201ENSMUST00000191658 295 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm44540-201ENSMUST00000205640 354 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm45047-201ENSMUST00000207651 309 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 AC153363.1-201ENSMUST00000213572 359 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm34105-201ENSMUST00000214812 571 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Nat8f5-201ENSMUST00000032074 986 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Rpl27-ps1-201ENSMUST00000088784 408 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm8055-201ENSMUST00000099956 1008 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Dhrs7b-201ENSMUST00000042281 1553 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Rims2-204ENSMUST00000226410 3685 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 Umodl1-201ENSMUST00000066554 5007 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Mat1a-201ENSMUST00000047286 3208 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.31□□□□□ -0.92
Clrn1Q8K445 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Clrn1Q8K445 Gm16059-201ENSMUST00000135583 3778 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm37302-201ENSMUST00000192958 2998 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 AC129336.1-201ENSMUST00000220224 2277 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Slc17a2-202ENSMUST00000099697 1893 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Cep63-206ENSMUST00000162655 4180 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm14461-201ENSMUST00000067618 1780 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Bcl2l14-202ENSMUST00000111960 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Olfr1511-202ENSMUST00000214168 1468 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm24279-201ENSMUST00000104236 131 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm13413-201ENSMUST00000120953 602 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm8606-201ENSMUST00000121482 888 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm8425-201ENSMUST00000171395 769 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Clrn1Q8K445 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC9.3□□□□□ -0.92
Clrn1Q8K445 AC129323.1-201ENSMUST00000216733 470 ntBASIC9.3□□□□□ -0.92
Clrn1Q8K445 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms