Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm8919-201ENSMUST00000182028 1014 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 AY702102-202ENSMUST00000194651 1173 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 CT025602.2-201ENSMUST00000226553 772 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Sbk3-202ENSMUST00000144863 3152 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Epb41l3-215ENSMUST00000225977 3188 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm37178-201ENSMUST00000194962 1539 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Cpeb1os1-201ENSMUST00000207156 2112 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 4930435N07Rik-201ENSMUST00000208065 2127 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Zswim3-201ENSMUST00000052107 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm44639-201ENSMUST00000205859 3009 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Dlc1-206ENSMUST00000163663 5113 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Slc9a8-203ENSMUST00000109218 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 AC166836.1-201ENSMUST00000219933 1795 ntBASIC8.12□□□□□ -1.11
Trim63Q38HM4 Gm36426-201ENSMUST00000222903 1795 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Rbm5-214ENSMUST00000182659 3205 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Lrrc55-202ENSMUST00000111601 2900 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Sept2-214ENSMUST00000172165 3192 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim63Q38HM4 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Mak-203ENSMUST00000165087 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Actl9-201ENSMUST00000174088 1373 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Oprl1-202ENSMUST00000108763 2971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Pygl-202ENSMUST00000161083 2992 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Rnf19a-203ENSMUST00000228358 3452 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm42897-201ENSMUST00000201486 2112 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Itpr2-202ENSMUST00000079573 11679 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 AC126804.1-201ENSMUST00000216609 2079 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Mcm6-203ENSMUST00000190495 4355 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Rnf122-201ENSMUST00000046941 3582 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm12015-201ENSMUST00000117065 843 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm13914-201ENSMUST00000118202 991 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm6023-201ENSMUST00000118217 606 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm42915-201ENSMUST00000197478 323 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm43778-201ENSMUST00000199438 199 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm9794-201ENSMUST00000202370 423 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 AC157212.1-201ENSMUST00000228398 1075 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm44168-201ENSMUST00000204835 3539 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 C330007P06Rik-201ENSMUST00000047486 3467 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm44070-201ENSMUST00000203389 2220 ntBASIC8.11□□□□□ -1.11
Trim63Q38HM4 Nanog-203ENSMUST00000112581 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Itgb2l-201ENSMUST00000000161 2633 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Trim63Q38HM4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Bcl2l14-202ENSMUST00000111960 1578 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 P2rx2-206ENSMUST00000200214 1568 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Gm43790-201ENSMUST00000202694 2013 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 AC160118.1-201ENSMUST00000214497 2457 ntBASIC8.1□□□□□ -1.11
Trim63Q38HM4 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Rfpl4-201ENSMUST00000045215 1598 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Trim63Q38HM4 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms