Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Tas2r135-201ENSMUST00000070178 1093 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm22341-201ENSMUST00000083775 129 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm37671-201ENSMUST00000193198 2096 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Ints10-204ENSMUST00000110242 4250 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Kdm2b-205ENSMUST00000121739 4107 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Prune2-202ENSMUST00000223920 1803 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Cdh8-205ENSMUST00000142475 3216 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.42□□□□□ -0.9
Clrn1Q8K445 Polr3f-202ENSMUST00000110017 1632 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Clrn1Q8K445 Kif1b-202ENSMUST00000055647 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Itsn1-204ENSMUST00000113993 3787 ntTSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Rgs6-201ENSMUST00000101234 1368 ntTSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm44095-201ENSMUST00000204631 1931 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm23595-201ENSMUST00000104306 130 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm14654-201ENSMUST00000118620 447 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm8955-201ENSMUST00000182945 1008 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm40332-201ENSMUST00000199847 938 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm42689-201ENSMUST00000202403 404 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm3889-201ENSMUST00000212467 612 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm18515-201ENSMUST00000219755 797 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 AC161763.1-201ENSMUST00000227063 168 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm8256-202ENSMUST00000227964 828 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Rint1-201ENSMUST00000030852 3298 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 Miga2-202ENSMUST00000100214 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gdi2-201ENSMUST00000059515 2077 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Gm37125-201ENSMUST00000195877 1559 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 AC140393.1-201ENSMUST00000227959 1581 ntBASIC9.41□□□□□ -0.9
Clrn1Q8K445 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Clrn1Q8K445 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Aoc3-202ENSMUST00000103105 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Pnpla7-201ENSMUST00000045295 4574 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Mospd1-201ENSMUST00000023836 1763 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Mospd1-202ENSMUST00000096447 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Zbtb26-201ENSMUST00000067043 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Disp1-202ENSMUST00000171366 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Spin3-ps-201ENSMUST00000192825 770 ntBASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm2071-201ENSMUST00000193335 774 ntBASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm37197-201ENSMUST00000195607 401 ntBASIC9.4□□□□□ -0.9
Clrn1Q8K445 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Gm44044-201ENSMUST00000205178 1089 ntBASIC9.4□□□□□ -0.9
Clrn1Q8K445 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 4933400L20Rik-202ENSMUST00000211119 870 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Clrn1Q8K445 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms