Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Pfkfb2-201ENSMUST00000050406 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Olfr156-201ENSMUST00000079234 1740 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trub1Q8C0D0 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 AC121574.1-201ENSMUST00000228770 3132 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Nos2-203ENSMUST00000214397 3429 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Kif16b-203ENSMUST00000211861 4523 ntTSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Armc9-202ENSMUST00000113309 3555 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Tex21-202ENSMUST00000218426 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 4930430E12Rik-201ENSMUST00000139214 901 ntTSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm12906-201ENSMUST00000154610 441 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm4862-201ENSMUST00000170405 438 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm37782-201ENSMUST00000194879 678 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm44139-201ENSMUST00000204903 373 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm45047-201ENSMUST00000207651 309 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Cox7a1-202ENSMUST00000208441 485 ntTSL 2 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm34105-201ENSMUST00000214812 571 ntTSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Slc5a1-201ENSMUST00000011178 4104 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm9978-201ENSMUST00000069431 3273 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Etfbkmt-204ENSMUST00000111551 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Gm37521-201ENSMUST00000193177 2045 ntBASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Xdh-201ENSMUST00000024866 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 4930503B20Rik-201ENSMUST00000049703 2080 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trub1Q8C0D0 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm19165-201ENSMUST00000204453 1982 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Dusp16-202ENSMUST00000129433 3993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Cul4b-201ENSMUST00000016681 3354 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Mat1a-201ENSMUST00000047286 3208 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 A830018L16Rik-203ENSMUST00000137824 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Ppp1r9a-206ENSMUST00000175962 3769 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Ldb2-205ENSMUST00000199261 2367 ntAPPRIS ALT1 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm5054-201ENSMUST00000119351 453 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm12826-201ENSMUST00000121841 379 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm12269-201ENSMUST00000122273 717 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm13713-201ENSMUST00000139377 703 ntTSL 3 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm13713-202ENSMUST00000155472 285 ntTSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Mir432-201ENSMUST00000157230 75 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm5501-201ENSMUST00000165917 832 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm26834-201ENSMUST00000181815 950 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm4960-201ENSMUST00000182928 1001 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm5951-201ENSMUST00000220283 504 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Olfr1155-201ENSMUST00000099843 945 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Ilf3-203ENSMUST00000213518 3513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Krba1-208ENSMUST00000203371 4000 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trub1Q8C0D0 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms