Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb2S4R1M3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H2afb2S4R1M3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb2S4R1M3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.64■□□□□ 0.73
H2afb2S4R1M3 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb2S4R1M3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb2S4R1M3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb2S4R1M3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Gm13241-201ENSMUST00000094493 780 ntBASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb2S4R1M3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb2S4R1M3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb2S4R1M3 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb2S4R1M3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
H2afb2S4R1M3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb2S4R1M3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb2S4R1M3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms