Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2afb3S4R1G7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Golph3-202ENSMUST00000226517 2359 ntBASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
H2afb3S4R1G7 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb3S4R1G7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
H2afb3S4R1G7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
H2afb3S4R1G7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
H2afb3S4R1G7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.57■□□□□ 0.4
H2afb3S4R1G7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
H2afb3S4R1G7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
H2afb3S4R1G7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
H2afb3S4R1G7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb3S4R1G7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.53■□□□□ 0.4
H2afb3S4R1G7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb3S4R1G7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
H2afb3S4R1G7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb3S4R1G7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb3S4R1G7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
H2afb3S4R1G7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms