Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn8aQ9WTU3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Scn8aQ9WTU3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Scn8aQ9WTU3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Scn8aQ9WTU3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.95■□□□□ 0.78
Scn8aQ9WTU3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Scn8aQ9WTU3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn8aQ9WTU3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
Scn8aQ9WTU3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn8aQ9WTU3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn8aQ9WTU3 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn8aQ9WTU3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn8aQ9WTU3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.92■□□□□ 0.78
Scn8aQ9WTU3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn8aQ9WTU3 Reep4-203ENSMUST00000226563 1444 ntBASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn8aQ9WTU3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn8aQ9WTU3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Scn8aQ9WTU3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Scn8aQ9WTU3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn8aQ9WTU3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Scn8aQ9WTU3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn8aQ9WTU3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.89■□□□□ 0.77
Scn8aQ9WTU3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn8aQ9WTU3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn8aQ9WTU3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn8aQ9WTU3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scn8aQ9WTU3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms