Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp6ap1Q9R1Q9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atp6ap1Q9R1Q9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp6ap1Q9R1Q9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atp6ap1Q9R1Q9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atp6ap1Q9R1Q9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atp6ap1Q9R1Q9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atp6ap1Q9R1Q9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6ap1Q9R1Q9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6ap1Q9R1Q9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6ap1Q9R1Q9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6ap1Q9R1Q9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6ap1Q9R1Q9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6ap1Q9R1Q9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atp6ap1Q9R1Q9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atp6ap1Q9R1Q9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atp6ap1Q9R1Q9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atp6ap1Q9R1Q9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Atp6ap1Q9R1Q9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.13■□□□□ 0.65
Atp6ap1Q9R1Q9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Atp6ap1Q9R1Q9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms