Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn2Q9R0A1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clcn2Q9R0A1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn2Q9R0A1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn2Q9R0A1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clcn2Q9R0A1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clcn2Q9R0A1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clcn2Q9R0A1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Clcn2Q9R0A1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clcn2Q9R0A1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Clcn2Q9R0A1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms