Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps29Q9QZ88 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.81■□□□□ 0.6
Vps29Q9QZ88 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps29Q9QZ88 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
Vps29Q9QZ88 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps29Q9QZ88 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Vps29Q9QZ88 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps29Q9QZ88 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Vps29Q9QZ88 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Vps29Q9QZ88 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vps29Q9QZ88 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Vps29Q9QZ88 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps29Q9QZ88 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps29Q9QZ88 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps29Q9QZ88 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.75■□□□□ 0.59
Vps29Q9QZ88 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Vps29Q9QZ88 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Vps29Q9QZ88 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
Vps29Q9QZ88 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Vps29Q9QZ88 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps29Q9QZ88 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vps29Q9QZ88 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps29Q9QZ88 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 AA386476-201ENSMUST00000098781 1665 ntBASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps29Q9QZ88 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Gm9847-201ENSMUST00000052528 599 ntBASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps29Q9QZ88 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms