Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.9■□□□□ 0.78
Msh5Q9QUM7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Msh5Q9QUM7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Msh5Q9QUM7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Msh5Q9QUM7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Mir6236-201ENSMUST00000184437 123 ntBASIC19.87■□□□□ 0.77
Msh5Q9QUM7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Msh5Q9QUM7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Msh5Q9QUM7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Msh5Q9QUM7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Gm12922-201ENSMUST00000120626 809 ntBASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Msh5Q9QUM7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Msh5Q9QUM7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.83■□□□□ 0.77
Msh5Q9QUM7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Msh5Q9QUM7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Msh5Q9QUM7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.83■□□□□ 0.76
Msh5Q9QUM7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh5Q9QUM7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Msh5Q9QUM7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Golgb1-201ENSMUST00000023534 498 ntBASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms