Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rfx5Q9JL61 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rfx5Q9JL61 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Rfx5Q9JL61 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx5Q9JL61 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Rfx5Q9JL61 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rfx5Q9JL61 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx5Q9JL61 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx5Q9JL61 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfx5Q9JL61 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx5Q9JL61 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Gm11421-201ENSMUST00000122124 294 ntBASIC20.83■□□□□ 0.93
Rfx5Q9JL61 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rfx5Q9JL61 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
Rfx5Q9JL61 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.83■□□□□ 0.92
Rfx5Q9JL61 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.82■□□□□ 0.92
Rfx5Q9JL61 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx5Q9JL61 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx5Q9JL61 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx5Q9JL61 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.8■□□□□ 0.92
Rfx5Q9JL61 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rfx5Q9JL61 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx5Q9JL61 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rfx5Q9JL61 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Gm43060-201ENSMUST00000200621 289 ntBASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx5Q9JL61 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx5Q9JL61 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms