Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Gm10602-201ENSMUST00000098239 609 ntBASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Herpud2Q9JJC9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Herpud2Q9JJC9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Gm7514-201ENSMUST00000209475 934 ntBASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Herpud2Q9JJC9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Herpud2Q9JJC9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Herpud2Q9JJC9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herpud2Q9JJC9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Herpud2Q9JJC9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Herpud2Q9JJC9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Herpud2Q9JJC9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.6■□□□□ 0.73
Herpud2Q9JJC9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Herpud2Q9JJC9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Herpud2Q9JJC9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Herpud2Q9JJC9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Herpud2Q9JJC9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Herpud2Q9JJC9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Herpud2Q9JJC9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Herpud2Q9JJC9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Herpud2Q9JJC9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.56■□□□□ 0.72
Herpud2Q9JJC9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms