Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.24■□□□□ 0.51
Zc3h8Q9JJ48 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zc3h8Q9JJ48 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Zc3h8Q9JJ48 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Zc3h8Q9JJ48 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Zc3h8Q9JJ48 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zc3h8Q9JJ48 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zc3h8Q9JJ48 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.2■□□□□ 0.5
Zc3h8Q9JJ48 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Zc3h8Q9JJ48 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.19■□□□□ 0.5
Zc3h8Q9JJ48 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Zc3h8Q9JJ48 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zc3h8Q9JJ48 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zc3h8Q9JJ48 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zc3h8Q9JJ48 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zc3h8Q9JJ48 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zc3h8Q9JJ48 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Gm18284-201ENSMUST00000172604 624 ntBASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Zc3h8Q9JJ48 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Zc3h8Q9JJ48 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms