Protein–RNA interactions for Protein: Q9EQJ0

Tpcn1, Two pore calcium channel protein 1, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpcn1Q9EQJ0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpcn1Q9EQJ0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpcn1Q9EQJ0 Gm43137-201ENSMUST00000198052 594 ntBASIC21.66■■□□□ 1.06
Tpcn1Q9EQJ0 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.66■■□□□ 1.06
Tpcn1Q9EQJ0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.66■■□□□ 1.06
Tpcn1Q9EQJ0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpcn1Q9EQJ0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tpcn1Q9EQJ0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tpcn1Q9EQJ0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Tpcn1Q9EQJ0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpcn1Q9EQJ0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Tpcn1Q9EQJ0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.65■■□□□ 1.06
Tpcn1Q9EQJ0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Tpcn1Q9EQJ0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tpcn1Q9EQJ0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tpcn1Q9EQJ0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tpcn1Q9EQJ0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tpcn1Q9EQJ0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.64■■□□□ 1.05
Tpcn1Q9EQJ0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.64■■□□□ 1.05
Tpcn1Q9EQJ0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tpcn1Q9EQJ0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tpcn1Q9EQJ0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tpcn1Q9EQJ0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpcn1Q9EQJ0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tpcn1Q9EQJ0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tpcn1Q9EQJ0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tpcn1Q9EQJ0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tpcn1Q9EQJ0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tpcn1Q9EQJ0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpcn1Q9EQJ0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.58■■□□□ 1.05
Tpcn1Q9EQJ0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tpcn1Q9EQJ0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpcn1Q9EQJ0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpcn1Q9EQJ0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tpcn1Q9EQJ0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Tpcn1Q9EQJ0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tpcn1Q9EQJ0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tpcn1Q9EQJ0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Mir7075-201ENSMUST00000184187 82 ntBASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Gm6139-201ENSMUST00000079261 882 ntBASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tpcn1Q9EQJ0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Gm43530-201ENSMUST00000195920 274 ntBASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tpcn1Q9EQJ0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms