Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cir1Q9DA19 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.96■□□□□ 0.3
Cir1Q9DA19 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cir1Q9DA19 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cir1Q9DA19 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.94■□□□□ 0.3
Cir1Q9DA19 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cir1Q9DA19 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.93■□□□□ 0.3
Cir1Q9DA19 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.93■□□□□ 0.3
Cir1Q9DA19 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cir1Q9DA19 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cir1Q9DA19 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.91■□□□□ 0.3
Cir1Q9DA19 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.91■□□□□ 0.3
Cir1Q9DA19 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cir1Q9DA19 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.9■□□□□ 0.3
Cir1Q9DA19 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cir1Q9DA19 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.89■□□□□ 0.3
Cir1Q9DA19 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Cir1Q9DA19 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cir1Q9DA19 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms