Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ssmem1Q9D9Y8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssmem1Q9D9Y8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssmem1Q9D9Y8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssmem1Q9D9Y8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssmem1Q9D9Y8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ssmem1Q9D9Y8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssmem1Q9D9Y8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ssmem1Q9D9Y8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ssmem1Q9D9Y8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.96■□□□□ 0.3
Ssmem1Q9D9Y8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Ssmem1Q9D9Y8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Ssmem1Q9D9Y8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Gm11421-201ENSMUST00000122124 294 ntBASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.95■□□□□ 0.3
Ssmem1Q9D9Y8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Gm43060-201ENSMUST00000200621 289 ntBASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ssmem1Q9D9Y8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ssmem1Q9D9Y8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Gm40848-201ENSMUST00000221998 324 ntBASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Ssmem1Q9D9Y8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ssmem1Q9D9Y8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ssmem1Q9D9Y8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ssmem1Q9D9Y8 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.89■□□□□ 0.29
Ssmem1Q9D9Y8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms