Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Upk3bl1Q9D701 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Upk3bl1Q9D701 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Upk3bl1Q9D701 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Upk3bl1Q9D701 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Grk6-206ENSMUST00000224995 2971 ntBASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Gm11687-201ENSMUST00000118911 886 ntBASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Upk3bl1Q9D701 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Upk3bl1Q9D701 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Upk3bl1Q9D701 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Upk3bl1Q9D701 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Upk3bl1Q9D701 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
Upk3bl1Q9D701 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Upk3bl1Q9D701 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.73■□□□□ 0.43
Upk3bl1Q9D701 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.73■□□□□ 0.43
Upk3bl1Q9D701 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Upk3bl1Q9D701 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms