Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lsm7Q9CQQ8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lsm7Q9CQQ8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Lsm7Q9CQQ8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.84■□□□□ 0.77
Lsm7Q9CQQ8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm7Q9CQQ8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm7Q9CQQ8 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.83■□□□□ 0.77
Lsm7Q9CQQ8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Lsm7Q9CQQ8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm7Q9CQQ8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Lsm7Q9CQQ8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm7Q9CQQ8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Lsm7Q9CQQ8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Lsm7Q9CQQ8 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Gm27801-201ENSMUST00000184174 223 ntBASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Gm42642-201ENSMUST00000200683 355 ntBASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Lsm7Q9CQQ8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Gm42778-201ENSMUST00000199644 553 ntBASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Lsm7Q9CQQ8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Lsm7Q9CQQ8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Gm18671-201ENSMUST00000214826 683 ntBASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lsm7Q9CQQ8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lsm7Q9CQQ8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms