Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Msh4Q99MT2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh4Q99MT2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh4Q99MT2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Msh4Q99MT2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh4Q99MT2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Msh4Q99MT2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.07■□□□□ 0.64
Msh4Q99MT2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Msh4Q99MT2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Msh4Q99MT2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.04■□□□□ 0.64
Msh4Q99MT2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.04■□□□□ 0.64
Msh4Q99MT2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Msh4Q99MT2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Msh4Q99MT2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Msh4Q99MT2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.02■□□□□ 0.64
Msh4Q99MT2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.02■□□□□ 0.64
Msh4Q99MT2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh4Q99MT2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Msh4Q99MT2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.01■□□□□ 0.63
Msh4Q99MT2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.01■□□□□ 0.63
Msh4Q99MT2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.01■□□□□ 0.63
Msh4Q99MT2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Msh4Q99MT2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh4Q99MT2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh4Q99MT2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Msh4Q99MT2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Msh4Q99MT2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19■□□□□ 0.63
Msh4Q99MT2 Gm5576-201ENSMUST00000075809 1236 ntBASIC19■□□□□ 0.63
Msh4Q99MT2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Msh4Q99MT2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Msh4Q99MT2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.99■□□□□ 0.63
Msh4Q99MT2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Msh4Q99MT2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Msh4Q99MT2 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms