Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Cttnbp2nlQ99LJ0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cttnbp2nlQ99LJ0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cttnbp2nlQ99LJ0 Gm13238-201ENSMUST00000117655 780 ntBASIC19.77■□□□□ 0.76
Cttnbp2nlQ99LJ0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cttnbp2nlQ99LJ0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.77■□□□□ 0.76
Cttnbp2nlQ99LJ0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cttnbp2nlQ99LJ0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cttnbp2nlQ99LJ0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cttnbp2nlQ99LJ0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cttnbp2nlQ99LJ0 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cttnbp2nlQ99LJ0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.74■□□□□ 0.75
Cttnbp2nlQ99LJ0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cttnbp2nlQ99LJ0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cttnbp2nlQ99LJ0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cttnbp2nlQ99LJ0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cttnbp2nlQ99LJ0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cttnbp2nlQ99LJ0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cttnbp2nlQ99LJ0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Gm43566-201ENSMUST00000196851 808 ntBASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cttnbp2nlQ99LJ0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cttnbp2nlQ99LJ0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 Gm7143-201ENSMUST00000222811 859 ntBASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Cttnbp2nlQ99LJ0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.68■□□□□ 0.74
Cttnbp2nlQ99LJ0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cttnbp2nlQ99LJ0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cttnbp2nlQ99LJ0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms