Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.86■□□□□ 0.61
Vmp1Q99KU0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Vmp1Q99KU0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vmp1Q99KU0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vmp1Q99KU0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.83■□□□□ 0.61
Vmp1Q99KU0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vmp1Q99KU0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vmp1Q99KU0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vmp1Q99KU0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.82■□□□□ 0.6
Vmp1Q99KU0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vmp1Q99KU0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vmp1Q99KU0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vmp1Q99KU0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vmp1Q99KU0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Gm12821-201ENSMUST00000120022 600 ntBASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.78■□□□□ 0.6
Vmp1Q99KU0 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms