Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp11Q99K46 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp11Q99K46 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp11Q99K46 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Usp11Q99K46 Gm43530-201ENSMUST00000195920 274 ntBASIC20.57■□□□□ 0.88
Usp11Q99K46 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp11Q99K46 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp11Q99K46 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp11Q99K46 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.57■□□□□ 0.88
Usp11Q99K46 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp11Q99K46 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp11Q99K46 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Usp11Q99K46 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp11Q99K46 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp11Q99K46 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Usp11Q99K46 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Usp11Q99K46 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp11Q99K46 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp11Q99K46 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp11Q99K46 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp11Q99K46 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Usp11Q99K46 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.55■□□□□ 0.88
Usp11Q99K46 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.55■□□□□ 0.88
Usp11Q99K46 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp11Q99K46 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp11Q99K46 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.54■□□□□ 0.88
Usp11Q99K46 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp11Q99K46 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp11Q99K46 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp11Q99K46 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp11Q99K46 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp11Q99K46 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Usp11Q99K46 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.53■□□□□ 0.88
Usp11Q99K46 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.53■□□□□ 0.88
Usp11Q99K46 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.53■□□□□ 0.88
Usp11Q99K46 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Usp11Q99K46 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp11Q99K46 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.52■□□□□ 0.88
Usp11Q99K46 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Usp11Q99K46 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Usp11Q99K46 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Usp11Q99K46 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.52■□□□□ 0.87
Usp11Q99K46 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp11Q99K46 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp11Q99K46 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp11Q99K46 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp11Q99K46 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Usp11Q99K46 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Usp11Q99K46 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.51■□□□□ 0.87
Usp11Q99K46 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp11Q99K46 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp11Q99K46 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp11Q99K46 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.5■□□□□ 0.87
Usp11Q99K46 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.5■□□□□ 0.87
Usp11Q99K46 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.5■□□□□ 0.87
Usp11Q99K46 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp11Q99K46 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.5■□□□□ 0.87
Usp11Q99K46 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp11Q99K46 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp11Q99K46 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Usp11Q99K46 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.49■□□□□ 0.87
Usp11Q99K46 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp11Q99K46 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.49■□□□□ 0.87
Usp11Q99K46 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Usp11Q99K46 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.49■□□□□ 0.87
Usp11Q99K46 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms