Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdha11Q91Y19 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdha11Q91Y19 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdha11Q91Y19 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdha11Q91Y19 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha11Q91Y19 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdha11Q91Y19 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdha11Q91Y19 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha11Q91Y19 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdha11Q91Y19 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdha11Q91Y19 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha11Q91Y19 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha11Q91Y19 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha11Q91Y19 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdha11Q91Y19 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha11Q91Y19 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha11Q91Y19 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdha11Q91Y19 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdha11Q91Y19 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdha11Q91Y19 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdha11Q91Y19 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Gm18284-201ENSMUST00000172604 624 ntBASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdha11Q91Y19 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms