Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha2Q91Y17 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdha2Q91Y17 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha2Q91Y17 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdha2Q91Y17 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 Gm40848-201ENSMUST00000221998 324 ntBASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdha2Q91Y17 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 Gm11421-201ENSMUST00000122124 294 ntBASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdha2Q91Y17 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdha2Q91Y17 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdha2Q91Y17 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha2Q91Y17 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.01■□□□□ 0.95
Pcdha2Q91Y17 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha2Q91Y17 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha2Q91Y17 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdha2Q91Y17 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha2Q91Y17 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdha2Q91Y17 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Gm10571-201ENSMUST00000097869 1638 ntBASIC21■□□□□ 0.95
Pcdha2Q91Y17 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha2Q91Y17 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdha2Q91Y17 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha2Q91Y17 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdha2Q91Y17 Gm43060-201ENSMUST00000200621 289 ntBASIC20.98■□□□□ 0.95
Pcdha2Q91Y17 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.98■□□□□ 0.95
Pcdha2Q91Y17 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha2Q91Y17 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha2Q91Y17 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha2Q91Y17 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha2Q91Y17 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha2Q91Y17 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.97■□□□□ 0.95
Pcdha2Q91Y17 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdha2Q91Y17 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha2Q91Y17 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha2Q91Y17 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Pcdha2Q91Y17 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha2Q91Y17 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pcdha2Q91Y17 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms