Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdha8Q91Y12 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha8Q91Y12 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha8Q91Y12 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha8Q91Y12 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha8Q91Y12 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Pcdha8Q91Y12 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha8Q91Y12 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha8Q91Y12 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha8Q91Y12 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha8Q91Y12 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha8Q91Y12 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha8Q91Y12 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.06■□□□□ 0.64
Pcdha8Q91Y12 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha8Q91Y12 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha8Q91Y12 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha8Q91Y12 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha8Q91Y12 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha8Q91Y12 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha8Q91Y12 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdha8Q91Y12 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha8Q91Y12 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha8Q91Y12 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Gm13241-201ENSMUST00000094493 780 ntBASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha8Q91Y12 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha8Q91Y12 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha8Q91Y12 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdha8Q91Y12 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdha8Q91Y12 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdha8Q91Y12 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdha8Q91Y12 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdha8Q91Y12 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Hsf1-204ENSMUST00000226872 2104 ntBASIC19■□□□□ 0.63
Pcdha8Q91Y12 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Gm43909-201ENSMUST00000203443 1876 ntBASIC19■□□□□ 0.63
Pcdha8Q91Y12 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdha8Q91Y12 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdha8Q91Y12 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms