Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb5Q91XZ5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.25■■□□□ 1.31
Pcdhb5Q91XZ5 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.25■■□□□ 1.31
Pcdhb5Q91XZ5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC23.25■■□□□ 1.31
Pcdhb5Q91XZ5 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb5Q91XZ5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.25■■□□□ 1.31
Pcdhb5Q91XZ5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Gm27011-201ENSMUST00000182352 972 ntBASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb5Q91XZ5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb5Q91XZ5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb5Q91XZ5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb5Q91XZ5 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb5Q91XZ5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb5Q91XZ5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb5Q91XZ5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb5Q91XZ5 Gm42911-201ENSMUST00000199360 1630 ntBASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb5Q91XZ5 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdhb5Q91XZ5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb5Q91XZ5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb5Q91XZ5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb5Q91XZ5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Pcdhb5Q91XZ5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb5Q91XZ5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb5Q91XZ5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb5Q91XZ5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb5Q91XZ5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb5Q91XZ5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb5Q91XZ5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb5Q91XZ5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms