Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Gm9847-201ENSMUST00000052528 599 ntBASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhga11Q91XY8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Pcdhga11Q91XY8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhga11Q91XY8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga11Q91XY8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga11Q91XY8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga11Q91XY8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga11Q91XY8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhga11Q91XY8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhga11Q91XY8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhga11Q91XY8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga11Q91XY8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga11Q91XY8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga11Q91XY8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga11Q91XY8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga11Q91XY8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhga11Q91XY8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhga11Q91XY8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhga11Q91XY8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.83■□□□□ 0.6
Pcdhga11Q91XY8 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhga11Q91XY8 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Gm12922-201ENSMUST00000120626 809 ntBASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.81■□□□□ 0.6
Pcdhga11Q91XY8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhga11Q91XY8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhga11Q91XY8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms