Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Serp2-204ENSMUST00000228055 705 ntBASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhga4Q91XY4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhga4Q91XY4 Spcs1-204ENSMUST00000226782 949 ntBASIC19.19■□□□□ 0.66
Pcdhga4Q91XY4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhga4Q91XY4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga4Q91XY4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga4Q91XY4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhga4Q91XY4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhga4Q91XY4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhga4Q91XY4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhga4Q91XY4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga4Q91XY4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga4Q91XY4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga4Q91XY4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pcdhga4Q91XY4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Pcdhga4Q91XY4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdhga4Q91XY4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdhga4Q91XY4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhga4Q91XY4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhga4Q91XY4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga4Q91XY4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.11■□□□□ 0.65
Pcdhga4Q91XY4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga4Q91XY4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga4Q91XY4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga4Q91XY4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhga4Q91XY4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms