Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhga9Q91XX9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhga9Q91XX9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhga9Q91XX9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhga9Q91XX9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Pcdhga9Q91XX9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhga9Q91XX9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhga9Q91XX9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga9Q91XX9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdhga9Q91XX9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga9Q91XX9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms