Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdh18Q8VHR0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdh18Q8VHR0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdh18Q8VHR0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdh18Q8VHR0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh18Q8VHR0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh18Q8VHR0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdh18Q8VHR0 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdh18Q8VHR0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Pcdh18Q8VHR0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdh18Q8VHR0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh18Q8VHR0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh18Q8VHR0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdh18Q8VHR0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh18Q8VHR0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms